Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd3Q6P9Z1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Mir3081-201ENSMUST00000175305 84 ntBASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Gm44454-201ENSMUST00000198541 138 ntBASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Smarcd3Q6P9Z1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarcd3Q6P9Z1 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcd3Q6P9Z1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms