Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Gm7153-201ENSMUST00000117092 455 ntBASIC17.09■□□□□ 0.33
Abcf1Q6P542 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Abcf1Q6P542 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.09■□□□□ 0.33
Abcf1Q6P542 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcf1Q6P542 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abcf1Q6P542 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abcf1Q6P542 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Abcf1Q6P542 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abcf1Q6P542 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abcf1Q6P542 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abcf1Q6P542 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Gm15372-201ENSMUST00000120729 834 ntBASIC17.08■□□□□ 0.32
Abcf1Q6P542 Gm27741-201ENSMUST00000185060 237 ntBASIC17.08■□□□□ 0.32
Abcf1Q6P542 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.08■□□□□ 0.32
Abcf1Q6P542 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abcf1Q6P542 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Gm12134-201ENSMUST00000122109 520 ntBASIC17.07■□□□□ 0.32
Abcf1Q6P542 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Gm44454-201ENSMUST00000198541 138 ntBASIC17.07■□□□□ 0.32
Abcf1Q6P542 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.07■□□□□ 0.32
Abcf1Q6P542 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC17.07■□□□□ 0.32
Abcf1Q6P542 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.07■□□□□ 0.32
Abcf1Q6P542 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abcf1Q6P542 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Abcf1Q6P542 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abcf1Q6P542 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms