Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt42Q6IFX2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Gm5417-201ENSMUST00000079706 384 ntBASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Krt42Q6IFX2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Gm13436-201ENSMUST00000120418 567 ntBASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Krt42Q6IFX2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Krt42Q6IFX2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms