Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.37■□□□□ 0.05
Six4Q61321 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Gm18206-201ENSMUST00000207027 926 ntBASIC15.37■□□□□ 0.05
Six4Q61321 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Six4Q61321 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.37■□□□□ 0.05
Six4Q61321 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six4Q61321 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.37■□□□□ 0.05
Six4Q61321 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.37■□□□□ 0.05
Six4Q61321 Celf4-206ENSMUST00000224553 1729 ntBASIC15.37■□□□□ 0.05
Six4Q61321 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Six4Q61321 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.36■□□□□ 0.05
Six4Q61321 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.36■□□□□ 0.05
Six4Q61321 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Six4Q61321 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.36■□□□□ 0.05
Six4Q61321 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Gm27525-201ENSMUST00000184465 107 ntBASIC15.36■□□□□ 0.05
Six4Q61321 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.36■□□□□ 0.05
Six4Q61321 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.36■□□□□ 0.05
Six4Q61321 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Six4Q61321 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Six4Q61321 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six4Q61321 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Six4Q61321 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Six4Q61321 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Six4Q61321 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.35■□□□□ 0.05
Six4Q61321 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.35■□□□□ 0.05
Six4Q61321 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Six4Q61321 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six4Q61321 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Six4Q61321 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Six4Q61321 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Six4Q61321 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.34■□□□□ 0.05
Six4Q61321 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Six4Q61321 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Six4Q61321 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Six4Q61321 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six4Q61321 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Six4Q61321 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six4Q61321 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
Six4Q61321 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Six4Q61321 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six4Q61321 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms