Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm8318-201ENSMUST00000182954 872 ntBASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Gm27702-201ENSMUST00000184512 56 ntBASIC12.19□□□□□ -0.46
Trav2Q5R1I9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav2Q5R1I9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav2Q5R1I9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms