Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-2Q5R1I3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav7-2Q5R1I3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Trav7-2Q5R1I3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Gm25406-201ENSMUST00000157599 105 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Gm17807-201ENSMUST00000186869 298 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Gm9172-201ENSMUST00000212092 954 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Gm7367-201ENSMUST00000057611 492 ntBASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav7-2Q5R1I3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Gm15165-201ENSMUST00000118140 502 ntBASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7-2Q5R1I3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Gm18669-201ENSMUST00000216049 778 ntBASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7-2Q5R1I3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms