Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm14722-201ENSMUST00000118943 689 ntBASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm9987-201ENSMUST00000069768 567 ntBASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm27011-201ENSMUST00000182352 972 ntBASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm13436-201ENSMUST00000120418 567 ntBASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms