Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim58Q5NCC9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Gm9682-201ENSMUST00000197505 556 ntBASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim58Q5NCC9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Gm7222-201ENSMUST00000117512 906 ntBASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Gm7230-201ENSMUST00000173026 815 ntBASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim58Q5NCC9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim58Q5NCC9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trim58Q5NCC9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim58Q5NCC9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim58Q5NCC9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.26■□□□□ 0.67
Trim58Q5NCC9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim58Q5NCC9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Gm7862-201ENSMUST00000121461 292 ntBASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.25■□□□□ 0.67
Trim58Q5NCC9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Trim58Q5NCC9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms