Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rc3h1Q4VGL6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Gm8396-201ENSMUST00000057361 823 ntBASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rc3h1Q4VGL6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rc3h1Q4VGL6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rc3h1Q4VGL6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms