Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Gm14140-201ENSMUST00000119999 995 ntBASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Gm10584-201ENSMUST00000207036 2628 ntBASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nhlrc4Q3UP44 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 AW822252-206ENSMUST00000208904 237 ntBASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Gm5364-201ENSMUST00000216789 889 ntBASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nhlrc4Q3UP44 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nhlrc4Q3UP44 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nhlrc4Q3UP44 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.97□□□□□ -0.17
Nhlrc4Q3UP44 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nhlrc4Q3UP44 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nhlrc4Q3UP44 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nhlrc4Q3UP44 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.97□□□□□ -0.17
Nhlrc4Q3UP44 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms