Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Gm43474-201ENSMUST00000196415 774 ntBASIC16.41■□□□□ 0.22
Snx27Q3UHD6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Gm18057-201ENSMUST00000208220 503 ntBASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Snx27Q3UHD6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Gm43125-201ENSMUST00000201724 730 ntBASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Gm5312-201ENSMUST00000203728 547 ntBASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.4■□□□□ 0.22
Snx27Q3UHD6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Snx27Q3UHD6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
Snx27Q3UHD6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Snx27Q3UHD6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Snx27Q3UHD6 Celf4-206ENSMUST00000224553 1729 ntBASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.39■□□□□ 0.21
Snx27Q3UHD6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Gm6973-201ENSMUST00000117080 721 ntBASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.38■□□□□ 0.21
Snx27Q3UHD6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.38■□□□□ 0.21
Snx27Q3UHD6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms