Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Mmp25Q3U435 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.32□□□□□ -0.12
Mmp25Q3U435 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.32□□□□□ -0.12
Mmp25Q3U435 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.32□□□□□ -0.12
Mmp25Q3U435 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.32□□□□□ -0.12
Mmp25Q3U435 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp25Q3U435 Asic1-205ENSMUST00000228185 1818 ntBASIC14.31□□□□□ -0.12
Mmp25Q3U435 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Mir8117-201ENSMUST00000184773 107 ntBASIC14.31□□□□□ -0.12
Mmp25Q3U435 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.31□□□□□ -0.12
Mmp25Q3U435 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp25Q3U435 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Gm12008-201ENSMUST00000117791 755 ntBASIC14.3□□□□□ -0.12
Mmp25Q3U435 Gm13597-201ENSMUST00000121239 375 ntBASIC14.3□□□□□ -0.12
Mmp25Q3U435 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.3□□□□□ -0.12
Mmp25Q3U435 Gm5264-201ENSMUST00000190584 848 ntBASIC14.3□□□□□ -0.12
Mmp25Q3U435 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp25Q3U435 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.3□□□□□ -0.12
Mmp25Q3U435 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms