Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vars2Q3U2A8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Vars2Q3U2A8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Vars2Q3U2A8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vars2Q3U2A8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vars2Q3U2A8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Vars2Q3U2A8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Gm15678-201ENSMUST00000117573 960 ntBASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Gm12390-201ENSMUST00000117897 397 ntBASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Gm9257-201ENSMUST00000221254 232 ntBASIC18.76■□□□□ 0.59
Vars2Q3U2A8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vars2Q3U2A8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Gm45453-201ENSMUST00000211758 853 ntBASIC18.75■□□□□ 0.59
Vars2Q3U2A8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.75■□□□□ 0.59
Vars2Q3U2A8 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vars2Q3U2A8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Gm42693-201ENSMUST00000196779 631 ntBASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vars2Q3U2A8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vars2Q3U2A8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms