Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Msx2Q03358 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.83□□□□□ -0.04
Msx2Q03358 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.83□□□□□ -0.04
Msx2Q03358 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Msx2Q03358 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx2Q03358 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Msx2Q03358 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Msx2Q03358 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Msx2Q03358 Gm11355-201ENSMUST00000121120 306 ntBASIC14.82□□□□□ -0.04
Msx2Q03358 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.82□□□□□ -0.04
Msx2Q03358 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.82□□□□□ -0.04
Msx2Q03358 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.82□□□□□ -0.04
Msx2Q03358 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.82□□□□□ -0.04
Msx2Q03358 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.82□□□□□ -0.04
Msx2Q03358 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Msx2Q03358 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.82□□□□□ -0.04
Msx2Q03358 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Msx2Q03358 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx2Q03358 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.81□□□□□ -0.04
Msx2Q03358 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msx2Q03358 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msx2Q03358 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msx2Q03358 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Msx2Q03358 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Mir770-201ENSMUST00000103252 94 ntBASIC14.81□□□□□ -0.04
Msx2Q03358 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.81□□□□□ -0.04
Msx2Q03358 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Msx2Q03358 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Msx2Q03358 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Msx2Q03358 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Msx2Q03358 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Msx2Q03358 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Msx2Q03358 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Msx2Q03358 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx2Q03358 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.8□□□□□ -0.04
Msx2Q03358 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Msx2Q03358 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Msx2Q03358 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Msx2Q03358 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Msx2Q03358 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Msx2Q03358 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms