Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smn1P97801 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.09□□□□□ -0.31
Smn1P97801 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smn1P97801 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smn1P97801 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smn1P97801 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Smn1P97801 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smn1P97801 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Smn1P97801 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smn1P97801 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smn1P97801 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smn1P97801 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smn1P97801 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.08□□□□□ -0.32
Smn1P97801 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smn1P97801 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.08□□□□□ -0.32
Smn1P97801 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.08□□□□□ -0.32
Smn1P97801 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smn1P97801 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smn1P97801 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Smn1P97801 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.07□□□□□ -0.32
Smn1P97801 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.07□□□□□ -0.32
Smn1P97801 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.07□□□□□ -0.32
Smn1P97801 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Smn1P97801 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.07□□□□□ -0.32
Smn1P97801 Gm25406-201ENSMUST00000157599 105 ntBASIC13.07□□□□□ -0.32
Smn1P97801 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.07□□□□□ -0.32
Smn1P97801 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.07□□□□□ -0.32
Smn1P97801 Gm18032-201ENSMUST00000222541 538 ntBASIC13.07□□□□□ -0.32
Smn1P97801 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.07□□□□□ -0.32
Smn1P97801 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Smn1P97801 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Smn1P97801 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Grk6-207ENSMUST00000225925 2769 ntBASIC13.07□□□□□ -0.32
Smn1P97801 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smn1P97801 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Smn1P97801 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smn1P97801 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Smn1P97801 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smn1P97801 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smn1P97801 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smn1P97801 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smn1P97801 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms