Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Gm13884-201ENSMUST00000118103 829 ntBASIC15.53■□□□□ 0.08
Thumpd3P97770 Gm12644-201ENSMUST00000119935 606 ntBASIC15.53■□□□□ 0.08
Thumpd3P97770 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.53■□□□□ 0.08
Thumpd3P97770 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.53■□□□□ 0.08
Thumpd3P97770 Rprl3-201ENSMUST00000157400 290 ntBASIC15.53■□□□□ 0.08
Thumpd3P97770 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.53■□□□□ 0.08
Thumpd3P97770 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.53■□□□□ 0.08
Thumpd3P97770 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.53■□□□□ 0.08
Thumpd3P97770 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.53■□□□□ 0.08
Thumpd3P97770 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Thumpd3P97770 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.53■□□□□ 0.08
Thumpd3P97770 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thumpd3P97770 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Gm15372-201ENSMUST00000120729 834 ntBASIC15.52■□□□□ 0.08
Thumpd3P97770 Gm11452-201ENSMUST00000122376 690 ntBASIC15.52■□□□□ 0.08
Thumpd3P97770 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.52■□□□□ 0.08
Thumpd3P97770 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thumpd3P97770 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thumpd3P97770 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Thumpd3P97770 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thumpd3P97770 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thumpd3P97770 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Thumpd3P97770 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thumpd3P97770 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thumpd3P97770 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thumpd3P97770 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Thumpd3P97770 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thumpd3P97770 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Thumpd3P97770 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Thumpd3P97770 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.51■□□□□ 0.07
Thumpd3P97770 Gm13312-201ENSMUST00000119631 718 ntBASIC15.51■□□□□ 0.07
Thumpd3P97770 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Thumpd3P97770 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.51■□□□□ 0.07
Thumpd3P97770 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.51■□□□□ 0.07
Thumpd3P97770 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Thumpd3P97770 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.51■□□□□ 0.07
Thumpd3P97770 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.51■□□□□ 0.07
Thumpd3P97770 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.51■□□□□ 0.07
Thumpd3P97770 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thumpd3P97770 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Thumpd3P97770 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.5■□□□□ 0.07
Thumpd3P97770 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.5■□□□□ 0.07
Thumpd3P97770 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.5■□□□□ 0.07
Thumpd3P97770 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms