Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smarcc1P97496 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Gm13233-201ENSMUST00000118760 1443 ntBASIC19■□□□□ 0.63
Smarcc1P97496 Gm13244-201ENSMUST00000118855 1446 ntBASIC19■□□□□ 0.63
Smarcc1P97496 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcc1P97496 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smarcc1P97496 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcc1P97496 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smarcc1P97496 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.99■□□□□ 0.63
Smarcc1P97496 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.99■□□□□ 0.63
Smarcc1P97496 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.99■□□□□ 0.63
Smarcc1P97496 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.99■□□□□ 0.63
Smarcc1P97496 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
Smarcc1P97496 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcc1P97496 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc1P97496 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.98■□□□□ 0.63
Smarcc1P97496 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.98■□□□□ 0.63
Smarcc1P97496 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smarcc1P97496 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smarcc1P97496 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.98■□□□□ 0.63
Smarcc1P97496 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Smarcc1P97496 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.98■□□□□ 0.63
Smarcc1P97496 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.98■□□□□ 0.63
Smarcc1P97496 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Syt7-204ENSMUST00000223586 1344 ntBASIC18.98■□□□□ 0.63
Smarcc1P97496 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc1P97496 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcc1P97496 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc1P97496 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Smarcc1P97496 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Smarcc1P97496 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.96■□□□□ 0.63
Smarcc1P97496 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.96■□□□□ 0.63
Smarcc1P97496 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.96■□□□□ 0.63
Smarcc1P97496 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smarcc1P97496 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcc1P97496 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcc1P97496 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcc1P97496 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smarcc1P97496 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms