Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.38□□□□□ -0.27
Lsm6P62313 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lsm6P62313 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.37□□□□□ -0.27
Lsm6P62313 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Gm7222-201ENSMUST00000117512 906 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm6P62313 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.37□□□□□ -0.27
Lsm6P62313 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Gm17971-201ENSMUST00000190239 806 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.37□□□□□ -0.27
Lsm6P62313 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Lsm6P62313 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.37□□□□□ -0.27
Lsm6P62313 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.37□□□□□ -0.27
Lsm6P62313 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lsm6P62313 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.37□□□□□ -0.27
Lsm6P62313 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Lsm6P62313 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm6P62313 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm6P62313 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lsm6P62313 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm6P62313 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lsm6P62313 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.36□□□□□ -0.27
Lsm6P62313 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm6P62313 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.36□□□□□ -0.27
Lsm6P62313 Gm7153-201ENSMUST00000117092 455 ntBASIC13.36□□□□□ -0.27
Lsm6P62313 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.36□□□□□ -0.27
Lsm6P62313 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.36□□□□□ -0.27
Lsm6P62313 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lsm6P62313 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm6P62313 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm6P62313 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Lsm6P62313 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Lsm6P62313 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lsm6P62313 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Lsm6P62313 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Lsm6P62313 Gm7230-201ENSMUST00000173026 815 ntBASIC13.35□□□□□ -0.27
Lsm6P62313 Gm37153-201ENSMUST00000193637 231 ntBASIC13.35□□□□□ -0.27
Lsm6P62313 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.35□□□□□ -0.27
Lsm6P62313 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Gm10819-201ENSMUST00000099988 561 ntBASIC13.35□□□□□ -0.27
Lsm6P62313 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms