Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vbp1P61759 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vbp1P61759 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vbp1P61759 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vbp1P61759 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vbp1P61759 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vbp1P61759 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Vbp1P61759 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.87□□□□□ -0.19
Vbp1P61759 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vbp1P61759 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.87□□□□□ -0.19
Vbp1P61759 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Vbp1P61759 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vbp1P61759 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Vbp1P61759 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vbp1P61759 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.86□□□□□ -0.19
Vbp1P61759 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Vbp1P61759 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.86□□□□□ -0.19
Vbp1P61759 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vbp1P61759 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.86□□□□□ -0.19
Vbp1P61759 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vbp1P61759 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vbp1P61759 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.86□□□□□ -0.19
Vbp1P61759 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.86□□□□□ -0.19
Vbp1P61759 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vbp1P61759 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Vbp1P61759 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Gm11539-201ENSMUST00000119837 557 ntBASIC13.85□□□□□ -0.19
Vbp1P61759 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Vbp1P61759 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
Vbp1P61759 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.85□□□□□ -0.19
Vbp1P61759 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.85□□□□□ -0.19
Vbp1P61759 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vbp1P61759 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vbp1P61759 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms