Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.03■□□□□ 0.32
Tpm1P58771 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tpm1P58771 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tpm1P58771 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tpm1P58771 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.03■□□□□ 0.32
Tpm1P58771 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tpm1P58771 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.02■□□□□ 0.32
Tpm1P58771 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.02■□□□□ 0.32
Tpm1P58771 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Tpm1P58771 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tpm1P58771 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm1P58771 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm1P58771 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm1P58771 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm1P58771 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tpm1P58771 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Tpm1P58771 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Tpm1P58771 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.01■□□□□ 0.31
Tpm1P58771 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.01■□□□□ 0.31
Tpm1P58771 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tpm1P58771 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tpm1P58771 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tpm1P58771 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tpm1P58771 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Tpm1P58771 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Tpm1P58771 Gm43697-201ENSMUST00000199637 2581 ntBASIC17■□□□□ 0.31
Tpm1P58771 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Gm43799-201ENSMUST00000201845 579 ntBASIC17■□□□□ 0.31
Tpm1P58771 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Tpm1P58771 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Gm7367-201ENSMUST00000057611 492 ntBASIC17■□□□□ 0.31
Tpm1P58771 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Gm12620-201ENSMUST00000119791 1986 ntBASIC17■□□□□ 0.31
Tpm1P58771 Gm12612-201ENSMUST00000140182 1986 ntBASIC17■□□□□ 0.31
Tpm1P58771 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17■□□□□ 0.31
Tpm1P58771 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tpm1P58771 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17■□□□□ 0.31
Tpm1P58771 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Tpm1P58771 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tpm1P58771 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17■□□□□ 0.31
Tpm1P58771 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17■□□□□ 0.31
Tpm1P58771 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tpm1P58771 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms