Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.25■□□□□ 0.03
Lim2P56563 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.25■□□□□ 0.03
Lim2P56563 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.25■□□□□ 0.03
Lim2P56563 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lim2P56563 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Lim2P56563 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lim2P56563 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.24■□□□□ 0.03
Lim2P56563 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.24■□□□□ 0.03
Lim2P56563 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.24■□□□□ 0.03
Lim2P56563 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.24■□□□□ 0.03
Lim2P56563 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.24■□□□□ 0.03
Lim2P56563 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.24■□□□□ 0.03
Lim2P56563 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.24■□□□□ 0.03
Lim2P56563 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.24■□□□□ 0.03
Lim2P56563 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.24■□□□□ 0.03
Lim2P56563 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.24■□□□□ 0.03
Lim2P56563 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lim2P56563 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.24■□□□□ 0.03
Lim2P56563 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lim2P56563 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lim2P56563 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.23■□□□□ 0.03
Lim2P56563 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lim2P56563 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.23■□□□□ 0.03
Lim2P56563 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Gm4899-201ENSMUST00000178708 719 ntBASIC15.23■□□□□ 0.03
Lim2P56563 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.23■□□□□ 0.03
Lim2P56563 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.23■□□□□ 0.03
Lim2P56563 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.23■□□□□ 0.03
Lim2P56563 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Lim2P56563 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lim2P56563 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lim2P56563 Sybu-209ENSMUST00000228639 4113 ntBASIC15.22■□□□□ 0.03
Lim2P56563 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Lim2P56563 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Lim2P56563 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lim2P56563 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lim2P56563 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lim2P56563 Gm14140-201ENSMUST00000119999 995 ntBASIC15.22■□□□□ 0.03
Lim2P56563 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lim2P56563 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lim2P56563 Gm8318-201ENSMUST00000182954 872 ntBASIC15.22■□□□□ 0.03
Lim2P56563 Gm27525-201ENSMUST00000184465 107 ntBASIC15.22■□□□□ 0.03
Lim2P56563 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.22■□□□□ 0.03
Lim2P56563 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lim2P56563 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lim2P56563 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
Lim2P56563 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lim2P56563 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lim2P56563 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lim2P56563 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms