Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.74□□□□□ -0.37
Cks2P56390 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cks2P56390 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cks2P56390 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cks2P56390 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cks2P56390 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.74□□□□□ -0.37
Cks2P56390 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Cks2P56390 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks2P56390 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Cks2P56390 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Cks2P56390 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.73□□□□□ -0.37
Cks2P56390 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Cks2P56390 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.73□□□□□ -0.37
Cks2P56390 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.73□□□□□ -0.37
Cks2P56390 Gm19164-201ENSMUST00000210667 640 ntBASIC12.73□□□□□ -0.37
Cks2P56390 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.73□□□□□ -0.37
Cks2P56390 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cks2P56390 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cks2P56390 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks2P56390 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cks2P56390 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.72□□□□□ -0.37
Cks2P56390 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.72□□□□□ -0.37
Cks2P56390 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cks2P56390 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cks2P56390 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cks2P56390 Rprl3-201ENSMUST00000157400 290 ntBASIC12.72□□□□□ -0.37
Cks2P56390 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.72□□□□□ -0.37
Cks2P56390 Gm6345-202ENSMUST00000180900 204 ntBASIC12.72□□□□□ -0.37
Cks2P56390 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cks2P56390 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.72□□□□□ -0.37
Cks2P56390 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.72□□□□□ -0.37
Cks2P56390 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cks2P56390 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.72□□□□□ -0.37
Cks2P56390 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks2P56390 Efs-202ENSMUST00000227037 2540 ntBASIC12.71□□□□□ -0.37
Cks2P56390 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks2P56390 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cks2P56390 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks2P56390 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks2P56390 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks2P56390 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks2P56390 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.71□□□□□ -0.37
Cks2P56390 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms