Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rfx3P48381 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Gm15165-201ENSMUST00000118140 502 ntBASIC13.8□□□□□ -0.2
Rfx3P48381 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Rfx3P48381 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Rfx3P48381 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Rfx3P48381 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.8□□□□□ -0.2
Rfx3P48381 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.8□□□□□ -0.2
Rfx3P48381 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.8□□□□□ -0.2
Rfx3P48381 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Rfx3P48381 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rfx3P48381 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.79□□□□□ -0.2
Rfx3P48381 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.79□□□□□ -0.2
Rfx3P48381 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx3P48381 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.78□□□□□ -0.2
Rfx3P48381 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Gm25745-201ENSMUST00000174945 133 ntBASIC13.78□□□□□ -0.2
Rfx3P48381 Gm27357-201ENSMUST00000183754 135 ntBASIC13.78□□□□□ -0.2
Rfx3P48381 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.78□□□□□ -0.2
Rfx3P48381 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx3P48381 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.78□□□□□ -0.2
Rfx3P48381 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.78□□□□□ -0.2
Rfx3P48381 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rfx3P48381 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms