Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Sdc2P43407 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.12■□□□□ 0.33
Sdc2P43407 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.12■□□□□ 0.33
Sdc2P43407 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.12■□□□□ 0.33
Sdc2P43407 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sdc2P43407 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sdc2P43407 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sdc2P43407 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.12■□□□□ 0.33
Sdc2P43407 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sdc2P43407 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.12■□□□□ 0.33
Sdc2P43407 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sdc2P43407 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.12■□□□□ 0.33
Sdc2P43407 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.12■□□□□ 0.33
Sdc2P43407 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sdc2P43407 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdc2P43407 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Sdc2P43407 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.11■□□□□ 0.33
Sdc2P43407 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.11■□□□□ 0.33
Sdc2P43407 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.11■□□□□ 0.33
Sdc2P43407 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.11■□□□□ 0.33
Sdc2P43407 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.11■□□□□ 0.33
Sdc2P43407 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Efs-202ENSMUST00000227037 2540 ntBASIC17.11■□□□□ 0.33
Sdc2P43407 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Sdc2P43407 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdc2P43407 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.1■□□□□ 0.33
Sdc2P43407 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sdc2P43407 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sdc2P43407 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.1■□□□□ 0.33
Sdc2P43407 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sdc2P43407 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.1■□□□□ 0.33
Sdc2P43407 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.1■□□□□ 0.33
Sdc2P43407 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.1■□□□□ 0.33
Sdc2P43407 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sdc2P43407 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sdc2P43407 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc2P43407 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.09■□□□□ 0.33
Sdc2P43407 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sdc2P43407 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sdc2P43407 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm8097-201ENSMUST00000117903 829 ntBASIC17.09■□□□□ 0.33
Sdc2P43407 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.09■□□□□ 0.33
Sdc2P43407 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.09■□□□□ 0.33
Sdc2P43407 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Sdc2P43407 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.09■□□□□ 0.33
Sdc2P43407 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms