Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.2□□□□□ -0.46
Cd27P41272 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.2□□□□□ -0.46
Cd27P41272 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.2□□□□□ -0.46
Cd27P41272 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.2□□□□□ -0.46
Cd27P41272 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.2□□□□□ -0.46
Cd27P41272 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.2□□□□□ -0.46
Cd27P41272 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cd27P41272 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cd27P41272 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd27P41272 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cd27P41272 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cd27P41272 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.19□□□□□ -0.46
Cd27P41272 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cd27P41272 Gm14140-201ENSMUST00000119999 995 ntBASIC12.19□□□□□ -0.46
Cd27P41272 Gm27525-201ENSMUST00000184465 107 ntBASIC12.19□□□□□ -0.46
Cd27P41272 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.19□□□□□ -0.46
Cd27P41272 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.19□□□□□ -0.46
Cd27P41272 Gm5364-201ENSMUST00000216789 889 ntBASIC12.19□□□□□ -0.46
Cd27P41272 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cd27P41272 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cd27P41272 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.19□□□□□ -0.46
Cd27P41272 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd27P41272 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.18□□□□□ -0.46
Cd27P41272 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Celf4-206ENSMUST00000224553 1729 ntBASIC12.18□□□□□ -0.46
Cd27P41272 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Cd27P41272 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.18□□□□□ -0.46
Cd27P41272 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cd27P41272 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd27P41272 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cd27P41272 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms