Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LdlrP35951 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.17■□□□□ 0.02
LdlrP35951 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.16■□□□□ 0.02
LdlrP35951 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.16■□□□□ 0.02
LdlrP35951 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.16■□□□□ 0.02
LdlrP35951 Gm2651-201ENSMUST00000203560 838 ntBASIC15.16■□□□□ 0.02
LdlrP35951 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.16■□□□□ 0.02
LdlrP35951 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LdlrP35951 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.16■□□□□ 0.02
LdlrP35951 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.15■□□□□ 0.02
LdlrP35951 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.15■□□□□ 0.02
LdlrP35951 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.15■□□□□ 0.02
LdlrP35951 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LdlrP35951 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LdlrP35951 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.15■□□□□ 0.02
LdlrP35951 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.15■□□□□ 0.02
LdlrP35951 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.15■□□□□ 0.02
LdlrP35951 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
LdlrP35951 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LdlrP35951 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LdlrP35951 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.15■□□□□ 0.02
LdlrP35951 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LdlrP35951 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LdlrP35951 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Gm12644-201ENSMUST00000119935 606 ntBASIC15.14■□□□□ 0.01
LdlrP35951 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.14■□□□□ 0.01
LdlrP35951 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LdlrP35951 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LdlrP35951 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.13■□□□□ 0.01
LdlrP35951 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.13■□□□□ 0.01
LdlrP35951 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.13■□□□□ 0.01
LdlrP35951 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.13■□□□□ 0.01
LdlrP35951 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms