Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Slc6a1P31648 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Slc6a1P31648 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a1P31648 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc6a1P31648 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Slc6a1P31648 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slc6a1P31648 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc6a1P31648 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.14□□□□□ -0.31
Slc6a1P31648 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Slc6a1P31648 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.14□□□□□ -0.31
Slc6a1P31648 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc6a1P31648 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.14□□□□□ -0.31
Slc6a1P31648 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Slc6a1P31648 Gm18115-201ENSMUST00000221209 621 ntBASIC13.14□□□□□ -0.31
Slc6a1P31648 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.14□□□□□ -0.31
Slc6a1P31648 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Slc6a1P31648 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slc6a1P31648 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Slc6a1P31648 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a1P31648 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc6a1P31648 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.13□□□□□ -0.31
Slc6a1P31648 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a1P31648 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.13□□□□□ -0.31
Slc6a1P31648 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms