Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.18■□□□□ 0.02
PdgfbP31240 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PdgfbP31240 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.18■□□□□ 0.02
PdgfbP31240 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.18■□□□□ 0.02
PdgfbP31240 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.18■□□□□ 0.02
PdgfbP31240 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PdgfbP31240 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.18■□□□□ 0.02
PdgfbP31240 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PdgfbP31240 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PdgfbP31240 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Asic1-205ENSMUST00000228185 1818 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PdgfbP31240 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.17■□□□□ 0.02
PdgfbP31240 Gm13216-201ENSMUST00000117145 591 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Gm4875-201ENSMUST00000118257 786 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PdgfbP31240 Gm12091-201ENSMUST00000146791 830 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Gm9719-201ENSMUST00000162765 543 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.17■□□□□ 0.02
PdgfbP31240 Gm42612-201ENSMUST00000197986 623 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Gm43170-201ENSMUST00000199827 612 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Gm44719-201ENSMUST00000206404 149 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PdgfbP31240 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PdgfbP31240 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PdgfbP31240 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PdgfbP31240 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.17■□□□□ 0.02
PdgfbP31240 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.17■□□□□ 0.02
PdgfbP31240 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PdgfbP31240 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.17■□□□□ 0.02
PdgfbP31240 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.16■□□□□ 0.02
PdgfbP31240 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PdgfbP31240 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PdgfbP31240 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PdgfbP31240 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.16■□□□□ 0.02
PdgfbP31240 Gm5566-201ENSMUST00000116118 459 ntBASIC15.16■□□□□ 0.02
PdgfbP31240 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.16■□□□□ 0.02
PdgfbP31240 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.16■□□□□ 0.02
PdgfbP31240 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.16■□□□□ 0.02
PdgfbP31240 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PdgfbP31240 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PdgfbP31240 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
PdgfbP31240 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PdgfbP31240 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PdgfbP31240 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PdgfbP31240 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.15■□□□□ 0.02
PdgfbP31240 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms