Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.3□□□□□ -0.6
TbpP29037 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.3□□□□□ -0.6
TbpP29037 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.3□□□□□ -0.6
TbpP29037 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TbpP29037 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.29□□□□□ -0.6
TbpP29037 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TbpP29037 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TbpP29037 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.29□□□□□ -0.6
TbpP29037 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
TbpP29037 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
TbpP29037 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TbpP29037 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TbpP29037 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TbpP29037 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
TbpP29037 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TbpP29037 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.29□□□□□ -0.6
TbpP29037 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TbpP29037 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.28□□□□□ -0.6
TbpP29037 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Gm23547-201ENSMUST00000158210 271 ntBASIC11.28□□□□□ -0.6
TbpP29037 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.28□□□□□ -0.6
TbpP29037 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TbpP29037 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
TbpP29037 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
TbpP29037 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TbpP29037 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
TbpP29037 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
TbpP29037 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TbpP29037 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TbpP29037 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TbpP29037 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TbpP29037 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms