Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl6P27784 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl6P27784 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl6P27784 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl6P27784 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Ccl6P27784 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.91□□□□□ -0.5
Ccl6P27784 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Asic1-205ENSMUST00000228185 1818 ntBASIC11.91□□□□□ -0.5
Ccl6P27784 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Gm24589-201ENSMUST00000116692 94 ntBASIC11.91□□□□□ -0.5
Ccl6P27784 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Ccl6P27784 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl6P27784 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccl6P27784 Gm34391-201ENSMUST00000203706 907 ntBASIC11.91□□□□□ -0.5
Ccl6P27784 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl6P27784 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ccl6P27784 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl6P27784 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccl6P27784 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl6P27784 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl6P27784 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccl6P27784 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 BC037039-201ENSMUST00000192003 2205 ntBASIC11.9□□□□□ -0.5
Ccl6P27784 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ccl6P27784 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.9□□□□□ -0.5
Ccl6P27784 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccl6P27784 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.9□□□□□ -0.5
Ccl6P27784 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Ccl6P27784 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ccl6P27784 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl6P27784 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccl6P27784 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ccl6P27784 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccl6P27784 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Ccl6P27784 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.9□□□□□ -0.51
Ccl6P27784 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccl6P27784 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccl6P27784 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms