Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Pde6aP27664 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pde6aP27664 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.65■□□□□ 0.42
Pde6aP27664 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pde6aP27664 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6aP27664 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pde6aP27664 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pde6aP27664 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Pde6aP27664 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pde6aP27664 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Gm11779-201ENSMUST00000118541 368 ntBASIC17.64■□□□□ 0.41
Pde6aP27664 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Pde6aP27664 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.64■□□□□ 0.41
Pde6aP27664 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Pde6aP27664 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.64■□□□□ 0.41
Pde6aP27664 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pde6aP27664 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Pde6aP27664 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pde6aP27664 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pde6aP27664 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6aP27664 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pde6aP27664 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.63■□□□□ 0.41
Pde6aP27664 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.63■□□□□ 0.41
Pde6aP27664 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.63■□□□□ 0.41
Pde6aP27664 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pde6aP27664 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Pde6aP27664 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6aP27664 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pde6aP27664 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pde6aP27664 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Gm12260-201ENSMUST00000122447 411 ntBASIC17.62■□□□□ 0.41
Pde6aP27664 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.62■□□□□ 0.41
Pde6aP27664 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.62■□□□□ 0.41
Pde6aP27664 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.62■□□□□ 0.41
Pde6aP27664 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.62■□□□□ 0.41
Pde6aP27664 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pde6aP27664 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pde6aP27664 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6aP27664 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pde6aP27664 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms