Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clk1P22518 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Clk1P22518 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.22□□□□□ -0.13
Clk1P22518 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.22□□□□□ -0.13
Clk1P22518 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.22□□□□□ -0.13
Clk1P22518 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clk1P22518 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Clk1P22518 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.22□□□□□ -0.13
Clk1P22518 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clk1P22518 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.22□□□□□ -0.13
Clk1P22518 Gm19164-201ENSMUST00000210667 640 ntBASIC14.22□□□□□ -0.13
Clk1P22518 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.22□□□□□ -0.13
Clk1P22518 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clk1P22518 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk1P22518 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Clk1P22518 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.21□□□□□ -0.13
Clk1P22518 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.21□□□□□ -0.13
Clk1P22518 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.21□□□□□ -0.13
Clk1P22518 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clk1P22518 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk1P22518 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk1P22518 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clk1P22518 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk1P22518 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk1P22518 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clk1P22518 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.2□□□□□ -0.14
Clk1P22518 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Gm18622-201ENSMUST00000219361 595 ntBASIC14.2□□□□□ -0.14
Clk1P22518 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clk1P22518 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clk1P22518 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clk1P22518 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clk1P22518 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clk1P22518 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms