Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm10013-201ENSMUST00000106074 672 ntBASIC13.97□□□□□ -0.17
Hmgn1P18608 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgn1P18608 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgn1P18608 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Hmgn1P18608 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hmgn1P18608 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hmgn1P18608 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hmgn1P18608 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgn1P18608 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hmgn1P18608 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.96□□□□□ -0.17
Hmgn1P18608 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.96□□□□□ -0.17
Hmgn1P18608 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Gm6433-201ENSMUST00000118634 875 ntBASIC13.96□□□□□ -0.17
Hmgn1P18608 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.96□□□□□ -0.17
Hmgn1P18608 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.96□□□□□ -0.17
Hmgn1P18608 Gm45328-201ENSMUST00000210942 917 ntBASIC13.96□□□□□ -0.17
Hmgn1P18608 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmgn1P18608 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgn1P18608 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Hmgn1P18608 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgn1P18608 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgn1P18608 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgn1P18608 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.96□□□□□ -0.18
Hmgn1P18608 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Hmgn1P18608 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Hmgn1P18608 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgn1P18608 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmgn1P18608 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hmgn1P18608 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.95□□□□□ -0.18
Hmgn1P18608 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Gm5587-201ENSMUST00000206270 674 ntBASIC13.95□□□□□ -0.18
Hmgn1P18608 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.95□□□□□ -0.18
Hmgn1P18608 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hmgn1P18608 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.95□□□□□ -0.18
Hmgn1P18608 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmgn1P18608 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hmgn1P18608 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hmgn1P18608 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.94□□□□□ -0.18
Hmgn1P18608 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.94□□□□□ -0.18
Hmgn1P18608 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.94□□□□□ -0.18
Hmgn1P18608 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.94□□□□□ -0.18
Hmgn1P18608 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.94□□□□□ -0.18
Hmgn1P18608 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.94□□□□□ -0.18
Hmgn1P18608 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Hmgn1P18608 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.94□□□□□ -0.18
Hmgn1P18608 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms