Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.26□□□□□ -0.13
Sod1P08228 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.26□□□□□ -0.13
Sod1P08228 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sod1P08228 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
Sod1P08228 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Sod1P08228 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.25□□□□□ -0.13
Sod1P08228 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.25□□□□□ -0.13
Sod1P08228 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.25□□□□□ -0.13
Sod1P08228 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.25□□□□□ -0.13
Sod1P08228 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.25□□□□□ -0.13
Sod1P08228 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sod1P08228 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sod1P08228 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sod1P08228 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sod1P08228 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sod1P08228 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sod1P08228 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sod1P08228 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Gm9063-201ENSMUST00000223299 582 ntBASIC14.24□□□□□ -0.13
Sod1P08228 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sod1P08228 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sod1P08228 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sod1P08228 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Sod1P08228 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Sod1P08228 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sod1P08228 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sod1P08228 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.23□□□□□ -0.13
Sod1P08228 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sod1P08228 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Sod1P08228 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Sod1P08228 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Gm14767-201ENSMUST00000121559 586 ntBASIC14.23□□□□□ -0.13
Sod1P08228 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sod1P08228 Gm27533-201ENSMUST00000183800 152 ntBASIC14.23□□□□□ -0.13
Sod1P08228 Gm27680-201ENSMUST00000184192 160 ntBASIC14.23□□□□□ -0.13
Sod1P08228 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.23□□□□□ -0.13
Sod1P08228 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.23□□□□□ -0.13
Sod1P08228 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sod1P08228 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sod1P08228 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sod1P08228 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
Sod1P08228 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.23□□□□□ -0.13
Sod1P08228 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.23□□□□□ -0.13
Sod1P08228 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sod1P08228 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sod1P08228 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sod1P08228 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Sod1P08228 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.22□□□□□ -0.13
Sod1P08228 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Sod1P08228 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.22□□□□□ -0.13
Sod1P08228 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sod1P08228 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sod1P08228 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sod1P08228 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sod1P08228 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sod1P08228 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sod1P08228 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sod1P08228 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms