Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CfdP03953 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CfdP03953 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.75□□□□□ -0.37
CfdP03953 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.75□□□□□ -0.37
CfdP03953 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.75□□□□□ -0.37
CfdP03953 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CfdP03953 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.74□□□□□ -0.37
CfdP03953 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CfdP03953 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.74□□□□□ -0.37
CfdP03953 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.74□□□□□ -0.37
CfdP03953 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.74□□□□□ -0.37
CfdP03953 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.74□□□□□ -0.37
CfdP03953 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.74□□□□□ -0.37
CfdP03953 Gm5417-201ENSMUST00000079706 384 ntBASIC12.74□□□□□ -0.37
CfdP03953 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CfdP03953 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CfdP03953 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CfdP03953 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CfdP03953 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CfdP03953 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.73□□□□□ -0.37
CfdP03953 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CfdP03953 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.73□□□□□ -0.37
CfdP03953 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CfdP03953 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CfdP03953 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CfdP03953 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.73□□□□□ -0.37
CfdP03953 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CfdP03953 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.73□□□□□ -0.37
CfdP03953 Gm13436-201ENSMUST00000120418 567 ntBASIC12.73□□□□□ -0.37
CfdP03953 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.73□□□□□ -0.37
CfdP03953 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.73□□□□□ -0.37
CfdP03953 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.73□□□□□ -0.37
CfdP03953 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CfdP03953 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.73□□□□□ -0.37
CfdP03953 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CfdP03953 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CfdP03953 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CfdP03953 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CfdP03953 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.72□□□□□ -0.37
CfdP03953 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CfdP03953 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CfdP03953 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CfdP03953 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CfdP03953 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.72□□□□□ -0.37
CfdP03953 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.72□□□□□ -0.37
CfdP03953 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CfdP03953 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms