Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col4a1P02463 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.53■□□□□ 0.56
Col4a1P02463 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col4a1P02463 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Col4a1P02463 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Gm24694-201ENSMUST00000180054 110 ntBASIC18.53■□□□□ 0.56
Col4a1P02463 Gm27663-201ENSMUST00000184839 110 ntBASIC18.53■□□□□ 0.56
Col4a1P02463 Gm7653-201ENSMUST00000214567 508 ntBASIC18.53■□□□□ 0.56
Col4a1P02463 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Syt7-204ENSMUST00000223586 1344 ntBASIC18.52■□□□□ 0.56
Col4a1P02463 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Gm22189-201ENSMUST00000103822 86 ntBASIC18.52■□□□□ 0.56
Col4a1P02463 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.52■□□□□ 0.56
Col4a1P02463 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.52■□□□□ 0.56
Col4a1P02463 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a1P02463 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.52■□□□□ 0.55
Col4a1P02463 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a1P02463 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Col4a1P02463 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a1P02463 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a1P02463 Gm5566-201ENSMUST00000116118 459 ntBASIC18.51■□□□□ 0.55
Col4a1P02463 Gm4875-201ENSMUST00000118257 786 ntBASIC18.51■□□□□ 0.55
Col4a1P02463 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col4a1P02463 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.51■□□□□ 0.55
Col4a1P02463 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a1P02463 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.51■□□□□ 0.55
Col4a1P02463 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.51■□□□□ 0.55
Col4a1P02463 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a1P02463 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col4a1P02463 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.5■□□□□ 0.55
Col4a1P02463 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Col4a1P02463 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Col4a1P02463 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.5■□□□□ 0.55
Col4a1P02463 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Col4a1P02463 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.5■□□□□ 0.55
Col4a1P02463 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.5■□□□□ 0.55
Col4a1P02463 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Col4a1P02463 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.5■□□□□ 0.55
Col4a1P02463 Gm43438-201ENSMUST00000198133 379 ntBASIC18.5■□□□□ 0.55
Col4a1P02463 Gm6218-201ENSMUST00000219812 628 ntBASIC18.5■□□□□ 0.55
Col4a1P02463 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col4a1P02463 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col4a1P02463 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.5■□□□□ 0.55
Col4a1P02463 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a1P02463 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a1P02463 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a1P02463 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col4a1P02463 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a1P02463 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a1P02463 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.49■□□□□ 0.55
Col4a1P02463 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.49■□□□□ 0.55
Col4a1P02463 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col4a1P02463 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms