Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.17□□□□□ -0.62
TcraP01849 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
TcraP01849 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
TcraP01849 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.17□□□□□ -0.62
TcraP01849 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.16□□□□□ -0.62
TcraP01849 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.16□□□□□ -0.62
TcraP01849 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Mir5122-201ENSMUST00000175004 89 ntBASIC11.16□□□□□ -0.62
TcraP01849 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.16□□□□□ -0.62
TcraP01849 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.16□□□□□ -0.62
TcraP01849 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.16□□□□□ -0.62
TcraP01849 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.16□□□□□ -0.62
TcraP01849 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.16□□□□□ -0.62
TcraP01849 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TcraP01849 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TcraP01849 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.15□□□□□ -0.62
TcraP01849 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
TcraP01849 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.15□□□□□ -0.62
TcraP01849 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
TcraP01849 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
TcraP01849 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.15□□□□□ -0.62
TcraP01849 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
TcraP01849 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TcraP01849 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
TcraP01849 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.15□□□□□ -0.63
TcraP01849 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
TcraP01849 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
TcraP01849 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TcraP01849 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.14□□□□□ -0.63
TcraP01849 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
TcraP01849 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms