Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm6415-201ENSMUST00000118488 348 ntBASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm11543-201ENSMUST00000120758 370 ntBASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm12151-201ENSMUST00000121374 290 ntBASIC14.45□□□□□ -0.1
Tgfbr3O88393 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm16026-204ENSMUST00000162652 683 ntBASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tgfbr3O88393 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.44□□□□□ -0.1
Tgfbr3O88393 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Gm18737-201ENSMUST00000173594 937 ntBASIC14.44□□□□□ -0.1
Tgfbr3O88393 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.44□□□□□ -0.1
Tgfbr3O88393 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.44□□□□□ -0.1
Tgfbr3O88393 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tgfbr3O88393 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.43□□□□□ -0.1
Tgfbr3O88393 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Gm9824-201ENSMUST00000178707 561 ntBASIC14.43□□□□□ -0.1
Tgfbr3O88393 Gm27437-201ENSMUST00000183429 107 ntBASIC14.43□□□□□ -0.1
Tgfbr3O88393 Gm38294-201ENSMUST00000192831 381 ntBASIC14.43□□□□□ -0.1
Tgfbr3O88393 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tgfbr3O88393 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms