Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1i3O35627 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1i3O35627 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1i3O35627 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1i3O35627 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1i3O35627 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nr1i3O35627 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1i3O35627 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nr1i3O35627 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.38■□□□□ 0.21
Nr1i3O35627 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.38■□□□□ 0.21
Nr1i3O35627 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.38■□□□□ 0.21
Nr1i3O35627 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nr1i3O35627 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Nr1i3O35627 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.38■□□□□ 0.21
Nr1i3O35627 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1i3O35627 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nr1i3O35627 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.37■□□□□ 0.21
Nr1i3O35627 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.37■□□□□ 0.21
Nr1i3O35627 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Nr1i3O35627 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nr1i3O35627 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Nr1i3O35627 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.37■□□□□ 0.21
Nr1i3O35627 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1i3O35627 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.36■□□□□ 0.21
Nr1i3O35627 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.36■□□□□ 0.21
Nr1i3O35627 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.36■□□□□ 0.21
Nr1i3O35627 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Gm4535-201ENSMUST00000182274 558 ntBASIC16.36■□□□□ 0.21
Nr1i3O35627 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.36■□□□□ 0.21
Nr1i3O35627 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Gm10355-201ENSMUST00000097146 517 ntBASIC16.36■□□□□ 0.21
Nr1i3O35627 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.36■□□□□ 0.21
Nr1i3O35627 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Nr1i3O35627 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1i3O35627 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nr1i3O35627 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Nr1i3O35627 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms