Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Efnb3O35393 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Efnb3O35393 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Efnb3O35393 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.07□□□□□ -0.48
Efnb3O35393 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.07□□□□□ -0.48
Efnb3O35393 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.07□□□□□ -0.48
Efnb3O35393 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Efnb3O35393 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.07□□□□□ -0.48
Efnb3O35393 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.07□□□□□ -0.48
Efnb3O35393 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Efnb3O35393 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Efnb3O35393 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.07□□□□□ -0.48
Efnb3O35393 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.06□□□□□ -0.48
Efnb3O35393 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.06□□□□□ -0.48
Efnb3O35393 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Efnb3O35393 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Gm23634-201ENSMUST00000175071 91 ntBASIC12.06□□□□□ -0.48
Efnb3O35393 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Gm5587-201ENSMUST00000206270 674 ntBASIC12.06□□□□□ -0.48
Efnb3O35393 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.06□□□□□ -0.48
Efnb3O35393 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.06□□□□□ -0.48
Efnb3O35393 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.06□□□□□ -0.48
Efnb3O35393 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Efnb3O35393 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Efnb3O35393 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Efnb3O35393 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.05□□□□□ -0.48
Efnb3O35393 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.05□□□□□ -0.48
Efnb3O35393 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Efnb3O35393 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Efnb3O35393 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 AA414768-201ENSMUST00000121924 1257 ntBASIC12.05□□□□□ -0.48
Efnb3O35393 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.05□□□□□ -0.48
Efnb3O35393 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.05□□□□□ -0.48
Efnb3O35393 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.05□□□□□ -0.48
Efnb3O35393 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Efnb3O35393 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms