Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.16■□□□□ 0.5
Hdac1O09106 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Hdac1O09106 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.16■□□□□ 0.5
Hdac1O09106 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hdac1O09106 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Hdac1O09106 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hdac1O09106 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.16■□□□□ 0.5
Hdac1O09106 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.16■□□□□ 0.5
Hdac1O09106 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac1O09106 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.15■□□□□ 0.5
Hdac1O09106 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.15■□□□□ 0.5
Hdac1O09106 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Hdac1O09106 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.15■□□□□ 0.5
Hdac1O09106 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.15■□□□□ 0.5
Hdac1O09106 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hdac1O09106 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac1O09106 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hdac1O09106 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hdac1O09106 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.14■□□□□ 0.49
Hdac1O09106 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.14■□□□□ 0.49
Hdac1O09106 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hdac1O09106 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Hdac1O09106 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac1O09106 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.13■□□□□ 0.49
Hdac1O09106 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Hdac1O09106 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hdac1O09106 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hdac1O09106 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.13■□□□□ 0.49
Hdac1O09106 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.13■□□□□ 0.49
Hdac1O09106 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hdac1O09106 Gm8655-201ENSMUST00000221159 852 ntBASIC18.13■□□□□ 0.49
Hdac1O09106 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hdac1O09106 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hdac1O09106 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hdac1O09106 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac1O09106 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Hdac1O09106 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac1O09106 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms