Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trove2O08848 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.69■□□□□ 0.1
Trove2O08848 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trove2O08848 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.69■□□□□ 0.1
Trove2O08848 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.69■□□□□ 0.1
Trove2O08848 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Trove2O08848 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trove2O08848 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trove2O08848 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.68■□□□□ 0.1
Trove2O08848 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
Trove2O08848 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trove2O08848 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trove2O08848 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.68■□□□□ 0.1
Trove2O08848 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trove2O08848 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trove2O08848 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.68■□□□□ 0.1
Trove2O08848 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Gm11950-201ENSMUST00000121615 838 ntBASIC15.68■□□□□ 0.1
Trove2O08848 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.68■□□□□ 0.1
Trove2O08848 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trove2O08848 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trove2O08848 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trove2O08848 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trove2O08848 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Trove2O08848 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trove2O08848 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.67■□□□□ 0.1
Trove2O08848 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trove2O08848 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trove2O08848 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms