Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Gm24694-201ENSMUST00000180054 110 ntBASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Gm27663-201ENSMUST00000184839 110 ntBASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.93■□□□□ 0.3
B020004C17RikJ3QP07 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Gm15321-201ENSMUST00000121290 288 ntBASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Gm5479-201ENSMUST00000160578 435 ntBASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Gm28631-201ENSMUST00000190740 334 ntBASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
B020004C17RikJ3QP07 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Shd-206ENSMUST00000225145 998 ntBASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
B020004C17RikJ3QP07 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Celf4-206ENSMUST00000224553 1729 ntBASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
B020004C17RikJ3QP07 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms