Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim34bJ3QNR8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim34bJ3QNR8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim34bJ3QNR8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Trim34bJ3QNR8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim34bJ3QNR8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim34bJ3QNR8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Mir449b-201ENSMUST00000104833 80 ntBASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 AA543401-201ENSMUST00000164248 1269 ntBASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Trim34bJ3QNR8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim34bJ3QNR8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm22065-201ENSMUST00000103753 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm22066-201ENSMUST00000103761 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24932-201ENSMUST00000103763 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24115-201ENSMUST00000103799 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm22190-201ENSMUST00000103827 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm22191-201ENSMUST00000103831 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24721-201ENSMUST00000103849 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm28018-201ENSMUST00000103869 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm26399-201ENSMUST00000103937 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm25349-201ENSMUST00000177728 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm23616-201ENSMUST00000177797 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm25871-201ENSMUST00000177816 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24752-201ENSMUST00000178240 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24496-201ENSMUST00000178287 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm25649-201ENSMUST00000178476 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm25548-201ENSMUST00000178681 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm23147-201ENSMUST00000178841 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm26095-201ENSMUST00000179270 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm22171-201ENSMUST00000179283 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm23936-201ENSMUST00000179354 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm22619-201ENSMUST00000179516 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm25255-201ENSMUST00000179579 110 ntBASIC18.55■□□□□ 0.56
Trim34bJ3QNR8 Gm24755-201ENSMUST00000179691 110 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms