Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gm9682-201ENSMUST00000197505 556 ntBASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-3J3QMG8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13d-3J3QMG8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13d-3J3QMG8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Gm11764-201ENSMUST00000120221 623 ntBASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.39□□□□□ -0.27
Trav13d-3J3QMG8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 AV026068-213ENSMUST00000223675 1171 ntBASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-3J3QMG8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms