Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdh11xF6ZNL5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Gm11764-201ENSMUST00000120221 623 ntBASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh11xF6ZNL5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Pcdh11xF6ZNL5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Gm15173-201ENSMUST00000122049 433 ntBASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Gm6550-201ENSMUST00000187574 993 ntBASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh11xF6ZNL5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 AV026068-213ENSMUST00000223675 1171 ntBASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh11xF6ZNL5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms