Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15□□□□□ -0.01
Srp54bE9PXC0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Srp54bE9PXC0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Srp54bE9PXC0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Rprl2-201ENSMUST00000157150 290 ntBASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Rpph1-201ENSMUST00000175096 319 ntBASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Auts2-212ENSMUST00000178555 309 ntBASIC14.99□□□□□ -0.01
Srp54bE9PXC0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srp54bE9PXC0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Gm5312-201ENSMUST00000203728 547 ntBASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srp54bE9PXC0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Gm10154-201ENSMUST00000084445 354 ntBASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Srp54bE9PXC0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Srp54bE9PXC0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Srp54bE9PXC0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.96□□□□□ -0.01
Srp54bE9PXC0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.96□□□□□ -0.01
Srp54bE9PXC0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Srp54bE9PXC0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Srp54bE9PXC0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms