Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.66□□□□□ -0.22
Shank1D3YZU1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shank1D3YZU1 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.66□□□□□ -0.22
Shank1D3YZU1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.65□□□□□ -0.22
Shank1D3YZU1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.65□□□□□ -0.22
Shank1D3YZU1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Shank1D3YZU1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Shank1D3YZU1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.64□□□□□ -0.23
Shank1D3YZU1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Gm13015-201ENSMUST00000118674 204 ntBASIC13.64□□□□□ -0.23
Shank1D3YZU1 Gm44855-201ENSMUST00000205725 362 ntBASIC13.64□□□□□ -0.23
Shank1D3YZU1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Shank1D3YZU1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shank1D3YZU1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms