Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.82□□□□□ -0.36
BC048679D3YXE9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Gm6433-201ENSMUST00000118634 875 ntBASIC12.82□□□□□ -0.36
BC048679D3YXE9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BC048679D3YXE9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Gm18032-201ENSMUST00000222541 538 ntBASIC12.81□□□□□ -0.36
BC048679D3YXE9 Gm7367-201ENSMUST00000057611 492 ntBASIC12.81□□□□□ -0.36
BC048679D3YXE9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BC048679D3YXE9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.8□□□□□ -0.36
BC048679D3YXE9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.8□□□□□ -0.36
BC048679D3YXE9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
BC048679D3YXE9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms