Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Mir5131-201ENSMUST00000175426 93 ntBASIC16.16■□□□□ 0.18
Rfx8D3YU81 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Rfx8D3YU81 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rfx8D3YU81 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.15■□□□□ 0.18
Rfx8D3YU81 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.15■□□□□ 0.18
Rfx8D3YU81 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.15■□□□□ 0.18
Rfx8D3YU81 Gm2651-201ENSMUST00000203560 838 ntBASIC16.15■□□□□ 0.18
Rfx8D3YU81 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx8D3YU81 Grk6-207ENSMUST00000225925 2769 ntBASIC16.15■□□□□ 0.18
Rfx8D3YU81 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.14■□□□□ 0.18
Rfx8D3YU81 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Gm5682-201ENSMUST00000173402 505 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 Mir5126-201ENSMUST00000175513 77 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 Gm7787-201ENSMUST00000216858 688 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx8D3YU81 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.14■□□□□ 0.17
Rfx8D3YU81 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.13■□□□□ 0.17
Rfx8D3YU81 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.13■□□□□ 0.17
Rfx8D3YU81 Gm8318-201ENSMUST00000182954 872 ntBASIC16.13■□□□□ 0.17
Rfx8D3YU81 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx8D3YU81 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms